BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB012E07LP1|AL426377
(801 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1581 1537 0.0
>3x_Contig1581
Length = 11429
Score = 1537 bits (769), Expect = 0.0
Identities = 788/801 (98%)
Strand = Plus / Plus
Query: 1 actttttagcgatggcctacgtcttgacagawacctcagctgggtatgctcttttgaaag 60
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 1349 actttttagcgatggcctacgtcttgacagaaacctcagctgggtatgctcttttgaaag 1408
Query: 61 catctgacaagaagatctataagtyctcttctttgattyaggatttgaacagcagttaca 120
|||||||||||||||||||||||| ||||||||||||| ||||||||||||||||| |||
Sbjct: 1409 catctgacaagaagatctataagtcctcttctttgattcaggatttgaacagcagtgaca 1468
Query: 121 aggtcttgaaccaattcaagattgctgctttctctaaattttcatcagctgcaaatgctt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1469 aggtcttgaaccaattcaagattgctgctttctctaaattttcatcagctgcaaatgctt 1528
Query: 181 tggaagaagctaactctgtkattkatggtaaagtctcttcccaattggaaaaactgttgg 240
||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||
Sbjct: 1529 tggaagaagctaactctgtgattgatggtaaagtctcttcccaattggaaaaactgttgg 1588
Query: 241 aagaatgcwagaccgacaaaaaggccaccttagttgtttctgaaactaaattggcaaacg 300
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1589 aagaatgcaagaccgacaaaaaggccaccttagttgtttctgaaactaaattggcaaacg 1648
Query: 301 ctatcaacaagttgggtttgaacttcaacgttgtctctgatgccgttaccttagatattt 360
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 1649 ctatcaacaagttgggtttgaacttcaacgttgtctctgatgccgtcaccttagatattt 1708
Query: 361 accgtgcagtcaaggagtacttgccagaacttttgccaggtttgaacgatcaagatcttt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1709 accgtgcagtcaaggagtacttgccagaacttttgccaggtttgaacgatcaagatcttt 1768
Query: 421 ccaagatgtcattgggtttggctcactccatcggtcgtyacaaattgaagttctctgctg 480
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 1769 ccaagatgtcattgggtttggctcactccatcggtcgtcacaaattgaagttctctgctg 1828
Query: 481 ataaagttgatgttatgatcatccaagctattgctttgctagacgatctagataaagaat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1829 ataaagttgatgttatgatcatccaagctattgctttgctagacgatctagataaagaat 1888
Query: 541 taaacacttacgctatgagatgtaaggdatggtacggttggcatttcccagaattggcca 600
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 1889 taaacacttacgctatgagatgtaaggaatggtacggttggcatttcccagaattggcca 1948
Query: 601 agattgttactgattctgttgcttacgccagaataatcttgaccatgggtattagagtta 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1949 agattgttactgattctgttgcttacgccagaataatcttgaccatgggtattagagtta 2008
Query: 661 atgctgctgaaactgacatgtctgawattttgcctgaagaaattgaagagagagttaaga 720
||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||
Sbjct: 2009 atgctgctgaaactgacatgtctgaaattttgcctgaagaaattgaagagagagtcaaga 2068
Query: 721 ccgctgccgaagtctccatgggtactgaaattaccccagttgatttgattwatatcaagt 780
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 2069 ccgctgccgaagtctccatgggtactgaaattaccccagttgatttgattaatatcaagt 2128
Query: 781 gtttagccgaacaaattgttg 801
|||||||||||||||||||||
Sbjct: 2129 gtttagccgaacaaattgttg 2149
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.712 1.32
Gapped
Lambda K H
1.39 0.712 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6045
Number of Sequences: 1807
Number of extensions: 6045
Number of successful extensions: 142
Number of sequences better than 1.0e-20: 1
length of query: 801
length of database: 10,358,551
effective HSP length: 16
effective length of query: 785
effective length of database: 10,329,639
effective search space: 8108766615
effective search space used: 8108766615
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (30.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.4 bits)